Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947964.1_cds_XP_016489404.1_79932

CDS Infomation

[gene=LOC107809314] [db_xref=GeneID:107809314] [protein=serine/threonine-protein kinase prpf4B-like] [protein_id=XP_016489404.1] [location=complement(join(36404..36592,36708..36782,36982..37145,37288..37402,37544..37835,37915..38071,38891..38963,40935..41003,41248..41450,41960..42138,42245..43392,44260..44604))] [gbkey=CDS]

Sequence

ATGGCCAGCGATTCCAATGAACCGTCACGTCGCAAGCACCGTCGATCTTCTCCCTCCGAT
GAAGACGACACCGAAGAACCAATAAAACGCCGTAAGCACCGCCACCATCACCGTCACCAT
CGCCACCACCGCCACCACAGCAAAAAACACGAAGAGAAATCCGATTCGAAACCCGATAAG
GACACGGGTAATCCGAATGATGAAATAGAGGATGTACCTCAACAAGTTGGTATTGTTATT
GGCGTTTCTACTTTAGGGCTCGATTATGATATGGAGGAAGGTGAAATTATTGAGGATGAT
GTGGCGGCTACTGCTACAGTTGGTGATGGTCATGAATTGGACATGGAATTGCATGAAGCT
CAACAACAGGGGCCTGCAGTGGAAAAAATTGACCAGAATTCCACTGCTTCAGGACGGCAC
GATGAGCAAAGGAAAAGTAGGAAGGCTGATAATTCTAGAGAAAGAAAGTCTAGTGACAAG
CATTTTGCGAATGGTAGTTGCATAGATGAATTTCATAAATTGGACTCTAAACCACAGAAG
AAAGATAGTTATGCTGGTGAAGAAGTTAGAAAACAAAAGAGCTACGATGACGATGAGAGC
CATTTACAGGATCAAAGAAAATCTTTGACTCCTGAAAGTTCTGGAAAGAGGCATAGATCT
GTTGGGGTATCATCTTCTCACGATGAGCACCTTGAAGAAAGACATGTTACGAAGTTATCC
AAGTCACCTGACAGGTTTAGAGGAAGATCACGATCCAAAAGCGTATTGGAGGAGTCTTTC
CTTGTACCAAAGTCCCGTGAGAAAGATGATGCATATGAGAAGGAAAGCAGATATAGAAGT
AACTTGGATGATGAAAAAATTGGACACAACAAGGACTATCGACATGGGAGCCGAGAGTCT
TCAAGGGATATTGAAAAGGAGCATAATTCTAGTTACAGCAGACACTCTAGGGACAGGTAT
TATAGAACGGAGAGTGTAGACAGGTATCGGGAGAGTAGCATCGAGAATGAAAGGGATAGA
GTGAGAGAGAAAGACAGGGAGCGTGAGTTGGCTAGAGAAAGGGACAGAGAAAGGGGAAGG
GAAAGAGATAAGGATAAGGAGAGGGAAAGGGAGAGGGAGAGAGACAGAGAGAGGGAAAGA
GAGAAAGCTCGAGATAGGGAAAGGGAGAGGGATAGAGAACGGGAATATGAGAGGGGAAGG
GAGAGGGGGAGGGAGAGAGATAGAGATAGAGATAATTTCAGAGAGAGGGAGGAGAGAGAA
AGGAGGAATAGGGATAGGGAAAGCAGAGGACGAAGTAGGGAGGCAGATAGAGATAAATAT
AGTGATAAGTCTAGCAGGCACCAGAGATATGATGCCCTTGATGATGGTTTTGCTTATAAT
AGACGTAATAGACATAATGAGACTGACATTCAGAGAGAAAGGACGAGTGATCACGCAAAA
AATGAAAACGCAAAGCAAAAAGCTGTAGAGGCAGACAGTGAGAAATCAAAAAGAGATGAA
GTTGAACAAGAGGACTATCAGGAAAAAATTGCTTTCCAGCTTGCTGAACAGGAAGACGAA
GAAGAACTTGAAAGAATTAAGGAGGAGAGCAGAAGGCGCAGGCAAGCTATTCTTGAAAAA
TATAAGAATCAGCAGTCCCAGAAGGAGCCAATTACTCAATCCGGGGACGTAGCTGAGCTT
CTTATGGATCAGTCTACTCAGAAGCCTGCAGCCGGAGATAATGCTGTGACAGTGTCATTT
GATGGTCAAACCAATGGTATAGATGTCCATGTTGATGAGCCAACGTTTTCTGTTGGGAAA
TCACCTCTGCAAGTTGGTCATATTGCTGACGAGCAGGCTTCTGGAGCTGGTGGATTGGGA
CAGGGTACACCAAAGAGTGAGAGGTCAGCTGACATGTTTTGTGACGATATATTTGGAGAA
TCACCTGCTGGCATCAGGAAATTGGGCAAAGGAGATGGCGTGGCAGTTCAGCGCAGTGGC
CTTCATGATAACTGGGATGATCCAGAAGGGTATTATAGTTATCGTTTCGGAGAAATTCTT
GATGACCGTTATGAGATTGTTGCTGCTCATGGTAAAGGAGTCTTTTCTACTGTTGTTCGG
GCTAAAGATCTCAAGGCTAGACCTGGTGACCCTGAGGAAGTAGCAATAAAAATGATACGC
AATAATGAAACGATGTATAAAGCTGGTATGGAAGAGTTGATCATTTTGAAGAAGCTAGTT
GGTGCAGATCCTGAAGACAAGCGCCATTGTGTTCGTTTTATTTCTAGCTTCAAGTACCGG
AATCATCTCTGTTTAGTTTTTGAGTCTCTACATATGAATCTCCGTGAGGTTCTGAAGAAG
TTCGGGCGTAACATTGGACTCCATCTCACTGCTGTTAGGGCGTTTTCGAAGCAACTTTTC
ATTGCTTTGAAGCATTTAAAAAATTGTGGCGTGCTTCACTGTGACATTAAACCCGACAAC
ATGTTGGTAAATGAATCGAAAAAAGTGTTGAAGCTTTGTGACTTTGGTAATGCTATGTTT
GCTGGCAAAAACGAAATTACTCCATACCTCGTGAGCCGTTTTTATCGTGCCCCAGAGATC
ATTCTTGGCTTGTCGTATGATCATCCAATGGATATATGGTCAGTTGGATGCTGTTTATTT
GAGCTTTATGCTGGGAAAGTCTTATTTCCTGGTGCAACTAATAATGACATGCTTCGTCTT
CATATGGAATTGAAAGGTCCATTTCCGAAGAAGATGCTTAGAAAGGGTGCATTTACAGAT
CAACATTTTGATCAAGATCTCAATTTTCTTGCCACCGAAGAGGATCCTGTTACAAAGAAG
GCTATAAGGAAGCTGATTGTCAACATCAAGCCAAAAGATATCAGTTCAATAATTTCAGGT
TCTCCGGGTGAAGACCCAAAGATGTTAGCTCACTTTAAAGATCTTATGGAGAGAATCTTC
GTGTTAGACCCAGACAAGAGAATAACTGTTTCCCAGGCATTGAGCCATCCATTCATCACG
GGCAAGTGA

Peptide Sequence

PEP ID

XP_016489404.1

PEP Infomation

PREDICTED: serine/threonine-protein kinase prpf4B-like [Nicotiana tabacum]

Sequence

MASDSNEPSRRKHRRSSPSDEDDTEEPIKRRKHRHHHRHHRHHRHHSKKHEEKSDSKPDK
DTGNPNDEIEDVPQQVGIVIGVSTLGLDYDMEEGEIIEDDVAATATVGDGHELDMELHEA
QQQGPAVEKIDQNSTASGRHDEQRKSRKADNSRERKSSDKHFANGSCIDEFHKLDSKPQK
KDSYAGEEVRKQKSYDDDESHLQDQRKSLTPESSGKRHRSVGVSSSHDEHLEERHVTKLS
KSPDRFRGRSRSKSVLEESFLVPKSREKDDAYEKESRYRSNLDDEKIGHNKDYRHGSRES
SRDIEKEHNSSYSRHSRDRYYRTESVDRYRESSIENERDRVREKDRERELARERDRERGR
ERDKDKERERERERDREREREKARDRERERDREREYERGRERGRERDRDRDNFREREERE
RRNRDRESRGRSREADRDKYSDKSSRHQRYDALDDGFAYNRRNRHNETDIQRERTSDHAK
NENAKQKAVEADSEKSKRDEVEQEDYQEKIAFQLAEQEDEEELERIKEESRRRRQAILEK
YKNQQSQKEPITQSGDVAELLMDQSTQKPAAGDNAVTVSFDGQTNGIDVHVDEPTFSVGK
SPLQVGHIADEQASGAGGLGQGTPKSERSADMFCDDIFGESPAGIRKLGKGDGVAVQRSG
LHDNWDDPEGYYSYRFGEILDDRYEIVAAHGKGVFSTVVRAKDLKARPGDPEEVAIKMIR
NNETMYKAGMEELIILKKLVGADPEDKRHCVRFISSFKYRNHLCLVFESLHMNLREVLKK
FGRNIGLHLTAVRAFSKQLFIALKHLKNCGVLHCDIKPDNMLVNESKKVLKLCDFGNAMF
AGKNEITPYLVSRFYRAPEIILGLSYDHPMDIWSVGCCLFELYAGKVLFPGATNNDMLRL
HMELKGPFPKKMLRKGAFTDQHFDQDLNFLATEEDPVTKKAIRKLIVNIKPKDISSIISG
SPGEDPKMLAHFKDLMERIFVLDPDKRITVSQALSHPFITGK

Transcript Sequence

Gene sequence data has not been registered.